BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H05SP1|AL430453
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1442 1645 0.0
>3x_Contig1442
Length = 8270
Score = 1645 bits (817), Expect = 0.0
Identities = 874/903 (96%), Gaps = 3/903 (0%)
Strand = Plus / Minus
Query: 1 gtgtcattgcatttttgcccc-tggcatcatatttttgagttggctttcgaattgatcac 59
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 8198 gtgtcattgcatttttgccccctggc-tcatatttttgagttggctttcgaattgatcac 8140
Query: 60 tttttactggggcgctacacttggttatgcgaacgttaagacgttgaccgawgcatctgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8139 tttttactggggcgctacacttggttatgcgaacgttaagacgttgaccgatgcatctgt 8080
Query: 120 tcgcaactgcmaaggtgacatcaaggagtacmaaccaactawcatggttggtgttgccgc 179
|||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 8079 tcgcaactgccaaggtgacatcaaggagttccaaccaactatcatggttggtgttgccgc 8020
Query: 180 tgtttgggaaagtgttagaaaggggatmtwggcacaaatwaacaagcwtcctgcgtaaac 239
||||||||||||||||||||||||||| | ||||||||| ||||||| |||||||| |||
Sbjct: 8019 tgtttgggaaagtgttagaaaggggatcttggcacaaattaacaagcttcctgcgttaac 7960
Query: 240 wcaaaaggtgtactggacaggwtamtatgcmaaawtaaaaatgaagaagtaccamattcc 299
|||||||||| ||||||||| || ||||| ||| ||||||||||||||| ||| |||||
Sbjct: 7959 tcaaaaggtgttctggacaggttactatgccaaattaaaaatgaagaagttccacattcc 7900
Query: 300 aggtggtgamactctaggtaamattwtgttcaagaaggtmagagaagccaccggtggatc 359
||||||||| ||||||||||| ||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 7899 aggtggtgacactctaggtaacattttgttcaagaaggtcagagaagccaccggtgg-tc 7841
Query: 360 atttaagatttgtgttgaacggtggttccccawtgtctagagaagcacaagagtatatca 419
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 7840 atttaagatttgtgttgaacggtggttccccattgtctagagaagcacaagagtttatca 7781
Query: 420 caaacttgatttgtccaatgtwgattggwtatggtttgactgaaaccatggctaacacaa 479
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 7780 caaacttgatttgtccaatgttgattggttatggtttgactgaaaccatggctaacacaa 7721
Query: 480 ctatcttacaaccagaacattttgaatacggagtcgctggtgacattgtcggtagtatca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7720 ctatcttacaaccagaacattttgaatacggagtcgctggtgacattgtcggtagtatca 7661
Query: 540 ctgtcaagttggtcgacgttgaagaattgggctacttcgcaaagaattctcaaggtgaag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7660 ctgtcaagttggtcgacgttgaagaattgggctacttcgcaaagaattctcaaggtgaag 7601
Query: 600 tctggattaaaggtgaacctgtcactcgagaatattacaaaaacgaggaagagactaagg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7600 tctggattaaaggtgaacctgtcactcgagaatattacaaaaacgaggaagagactaagg 7541
Query: 660 gttctatcacagatgatggctggttcaaaactggtgacattgcggaatggactccaaagg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7540 gttctatcacagatgatggctggttcaaaactggtgacattgcggaatggactccaaagg 7481
Query: 720 gtcaattaaagattattgaccgtaaaaagaacttggtgaagactcagaatggtgaataca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7480 gtcaattaaagattattgaccgtaaaaagaacttggtgaagactcagaatggtgaataca 7421
Query: 780 tcgcattagagaagttagaatccgtttacagatcttgtccatttgttcaaaacatctgtg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7420 tcgcattagagaagttagaatccgtttacagatcttgtccatttgttcaaaacatctgtg 7361
Query: 840 tttacgctgatcaaacaaaggttaaacccgtcggtatcattgttccaaatgaggctgcca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7360 tttacgctgatcaaacaaaggttaaacccgtcggtatcattgttccaaatgaggctgcca 7301
Query: 900 tca 902
|||
Sbjct: 7300 tca 7298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4998
Number of Sequences: 1807
Number of extensions: 4998
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.2 bits)